Publications:

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing
NA Bokulich, S Subramanian, JJ Faith, D Gevers, JI Gordon, R Knight, ...
Nature methods 10 (1), 57-59, 2013

A communal catalogue reveals Earth’s multiscale microbial diversity
LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ...
Nature 551 (7681), 457-463, 2017

Comparative genomics of the lactic acid bacteria
K Makarova, A Slesarev, Y Wolf, A Sorokin, B Mirkin, E Koonin, A Pavlov, ...
Proceedings of the National Academy of Sciences 103 (42), 15611-15616, 2006

The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome
DA Sela, J Chapman, A Adeuya, JH Kim, F Chen, TR Whitehead, ...
Proceedings of the National Academy of Sciences 105 (48), 18964-18969, 2008

Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate
NA Bokulich, JH Thorngate, PM Richardson, DA Mills
Proceedings of the National Academy of Sciences 111 (1), E139-E148, 2014